From bacteria to humans, chromatin to elongation, and activation to repression: The expanding roles of noncoding RNAs in regulating transcription
- 1 February 2009
- journal article
- review article
- Published by Taylor & Francis in Critical Reviews in Biochemistry and Molecular Biology
- Vol. 44 (1) , 3-15
- https://doi.org/10.1080/10409230802593995
Abstract
Noncoding RNAs (ncRNAs) have emerged as key regulators of transcription, often functioning as trans-acting factors akin to prototypical protein transcriptional regulators. Inside cells, ncRNAs are now known to control transcription of single genes as well as entire transcriptional programs in response to developmental and environmental cues. In doing so, they target nearly all levels of the transcription process from regulating chromatin structure through controlling transcript elongation. Moreover, trans-acting ncRNA transcriptional regulators have been found in organisms as diverse as bacteria and humans. With the recent discovery that much of the DNA in genomes is transcribed into ncRNAs with yet unknown function, it is likely that future studies will reveal many more ncRNA regulators of transcription.Keywords
This publication has 87 references indexed in Scilit:
- Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcriptionNature, 2008
- Human Alu RNA Is a Modular Transacting Repressor of mRNA Transcription during Heat ShockPublished by Elsevier ,2008
- Epigenetic silencing of tumour suppressor gene p15 by its antisense RNANature, 2008
- A Chromatin Landmark and Transcription Initiation at Most Promoters in Human CellsCell, 2007
- Silencing by imprinted noncoding RNAs: is transcription the answer?Trends in Genetics, 2007
- Functional Demarcation of Active and Silent Chromatin Domains in Human HOX Loci by Noncoding RNAsCell, 2007
- Genome-wide transcription and the implications for genomic organizationNature Reviews Genetics, 2007
- Repression of the human dihydrofolate reductase gene by a non-coding interfering transcriptNature, 2007
- Transcription of bxd Noncoding RNAs Promoted by Trithorax Represses Ubx in cis by Transcriptional InterferenceCell, 2006
- The non-coding Air RNA is required for silencing autosomal imprinted genesNature, 2002