Charge density in crystalline citrinin from X-ray diffraction at 19 K
- 1 June 1996
- journal article
- Published by Canadian Science Publishing in Canadian Journal of Chemistry
- Vol. 74 (6) , 1145-1161
- https://doi.org/10.1139/v96-129
Abstract
For the fungal metabolite citrinin, C13H14O5, the total experimental electron distribution ρ(r) and its Laplacian have been obtained from an extensive set (36 564 measurements) of single-crystal X-ray diffracted intensities at a temperature of 19 ± 2 K. Relevant steps in data collection and processing are reported. The resulting 7698 independent intensity data have been analysed with a multipole (pseudoatoms) formalism. The topological properties of ρ(r) have been determined according to the quantum theory of atoms in molecules. CC and CO bond path lengths have been obtained by numerical integration; their values are found to be well correlated with those of the electron density at the bond critical points. Topological features have been used to characterize the extension of the conjugated system of the molecule, and to confirm the stability of its rings, particularly the two formed by intramolecular H bonds. Maps of are presented, showing details in the valence charge distribution and providing a very sensitive tool for analysing dependence of the density on the model adopted to interpret X-ray data. The known chemical reactivity of the molecule towards nucleophiles at a Csp2 atom is confirmed by the shape of the molecular reactive surface (the zero envelope of ). Key words: experimental electron density, low-temperature X-ray diffraction, topological analysis, Laplacian of ρ.Keywords
This publication has 29 references indexed in Scilit:
- Topological definition of crystal structure: determination of the bonded interactions in solid molecular chlorineActa Crystallographica Section A Foundations of Crystallography, 1995
- On predicting scan profiles: the nature of the `aberration function'Acta Crystallographica Section A Foundations of Crystallography, 1993
- Experimental and theoretical study of the charge density in 2-methyl-4-nitroanilineThe Journal of Chemical Physics, 1992
- Electron Density from X-Ray DiffractionAnnual Review of Physical Chemistry, 1992
- The Laplacian of the electron density and the electrostatic potential of danburite, CaB2Si2O8The Journal of Physical Chemistry, 1992
- Proton transfer in the solid state: therymodynamic parameters from an X-ray study in the temperature range 20–293 KChemical Physics Letters, 1991
- Experimental Determination of Scan-truncation Losses from Low-temperature (16 K) Single-crystal X-ray MeasurementsAustralian Journal of Physics, 1988
- Scan-truncation corrections in single-crystal diffractometry: an empirical methodActa Crystallographica Section A Foundations of Crystallography, 1987
- Temperature dependence of tautomeric equilibria in the solid state: the case of citrininJournal of the American Chemical Society, 1984
- A novel low-temperature X-ray goniometer with closed-cycle cooling to about 18 KJournal of Applied Crystallography, 1980