PipTools: A Computational Toolkit to Annotate and Analyze Pairwise Comparisons of Genomic Sequences

This publication has 19 references indexed in Scilit:

• Genomic sequence analysis tools: a user's guide
  Trends in Genetics, 2001
• VISTA : visualizing global DNA sequence alignments of arbitrary length
  Bioinformatics, 2000
• Conserved noncoding sequences are reliable guides to regulatory elements
  Trends in Genetics, 2000
• Human and Mouse Gene Structure: Comparative Analysis and Application to Exon Prediction
  Genome Research, 2000
• Comparative Genome Sequence Analysis of the Bpa/Str Region in Mouse and Man
  Genome Research, 2000
• Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons
  Science, 2000
• PipMaker—A Web Server for Aligning Two Genomic DNA Sequences
  Genome Research, 2000
• A Computer Program for Aligning a cDNA Sequence with a Genomic DNA Sequence
  Genome Research, 1998
• Prediction of complete gene structures in human genomic DNA
  Journal of Molecular Biology, 1997
• Comparative analysis of 1196 orthologous mouse and human full-length mRNA and protein sequences.
  Genome Research, 1996