Hydron Transfer Catalyzed by Triosephosphate Isomerase. Products of the Direct and Phosphite-Activated Isomerization of [1-13C]-Glycolaldehyde in D2O
- 8 May 2009
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 48 (24) , 5769-5778
- https://doi.org/10.1021/bi900636c
Abstract
Product distributions for the reaction of glycolaldehyde labeled with carbon-13 at the carbonyl carbon ([1-13C]-GA) catalyzed by triosephosphate isomerase (TIM) in D2O at pD 7.0 in the presence of phosphite dianion and in its absence were determined by 1H NMR spectroscopy. We observe three products for the relatively fast phosphite-activated reaction (Amyes, T. L., and Richard, J. P. (2007) Biochemistry 46, 5841−5854): [2-13C]-GA from isomerization with intramolecular transfer of hydrogen (12% of products), [2-13C,2-2H]-GA from isomerization with incorporation of deuterium from D2O at C-2 (64% of products), and [1-13C,2-2H]-GA from incorporation of deuterium from D2O at C-2 (23% of products). The much slower unactivated reaction in the absence of phosphite results in formation of the same three products along with the doubly deuterated product [1-13C,2,2-2H2]-GA. The two isomerization products ([2-13C]-GA and [2-13C,2-2H]-GA) are formed in the same relative yields in both the unactivated and the phosphite-activated reactions. However, the additional [1-13C,2-2H]-GA and the doubly deuterated [1-13C,2,2-2H2]-GA formed in the unactivated TIM-catalyzed reaction are proposed to result from nonspecific reaction(s) at the protein surface. The data provide evidence that phosphite dianion affects the rate, but not the product distribution, of the TIM-catalyzed reaction of [1-13C]-GA at the enzyme active site. They are consistent with the conclusion that both reactions occur at an unstable loop-closed form of TIM and that activation of the isomerization reaction by phosphite dianion results from utilization of the intrinsic binding energy of phosphite dianion to stabilize the active loop-closed enzyme.Keywords
This publication has 43 references indexed in Scilit:
- A Substrate in Pieces: Allosteric Activation of Glycerol 3-Phosphate Dehydrogenase (NAD+) by Phosphite DianionBiochemistry, 2008
- Enzymatic Catalysis of Proton Transfer at Carbon: Activation of Triosephosphate Isomerase by Phosphite DianionBiochemistry, 2007
- Understanding Protein Lids: Kinetic Analysis of Active Hinge Mutants in Triosephosphate IsomeraseBiochemistry, 1999
- Proton Transfer in the Mechanism of Triosephosphate IsomeraseBiochemistry, 1998
- Determination of the amino acid requirements for a protein hinge in triosephosphate isomeraseProtein Science, 1998
- Understanding the rates of certain enzyme-catalyzed reactions: Proton abstraction from carbon acids, acyl transfer reactions, and displacement reactions of phosphodiestersBiochemistry, 1993
- Segmental motion in catalysis: investigation of a hydrogen bond critical for loop closure in the reaction of triosephosphate isomeraseBiochemistry, 1992
- A reliable method for random mutagenesis: the generation of mutant libraries using spiked oligodeoxyribonucleotide primersGene, 1989
- Triosephosphate isomerase catalysis is diffusion controlledBiochemistry, 1988
- Catalysis of .alpha.-hydrogen exchange. XIX. Bifunctional catalysis of the dedeuteration of acetone-d6 by conformationally constrained derivatives of N,N-dimethyl-1,3-propanediamineJournal of the American Chemical Society, 1976