Use of T cell receptor/HLA-DRB1*04 molecular modeling to predict site-specific interactions for the DR shared epitope associated with rheumatoid arthritis

This publication has 56 references indexed in Scilit:

• Tertiary templates for proteins: Use of packing criteria in the enumeration of allowed sequences for different structural classes
  Published by Elsevier ,2005
• A Structural Model for TCR Recognition of the HLA Class II Shared Epitope Sequence Implicated in Susceptibility to Rheumatoid Arthritis
  Journal of Autoimmunity, 1996
• AMBER, a package of computer programs for applying molecular mechanics, normal mode analysis, molecular dynamics and free energy calculations to simulate the structural and energetic properties of molecules
  Computer Physics Communications, 1995
• The Importance of DR4Dw4 β Chain Residues 70, 71, and 86 in Peptide Binding and T Cell Recognition
  Cellular Immunology, 1995
• Pocket 4 of the HLA-DR(α,β 1*0401) molecule is a major determinant of T cells recognition of peptide.
  The Journal of Experimental Medicine, 1995
• T-cell clones identify three distinct epitopes associated with HLA-Dw14
  Human Immunology, 1991
• Structural requirements for recognition of the HLA-Dw14 class II epitope: a key HLA determinant associated with rheumatoid arthritis.
  Proceedings of the National Academy of Sciences, 1990
• Novel method for the rapid evaluation of packing in protein structures
  Journal of Molecular Biology, 1990
• The shared epitope hypothesis. an approach to understanding the molecular genetics of susceptibility to rheumatoid arthritis
  Arthritis & Rheumatism, 1987
• An all atom force field for simulations of proteins and nucleic acids
  Journal of Computational Chemistry, 1986