Circular Dichroism Evidence for the Presence of Burst-Phase Intermediates on the Conformational Folding Pathway of Ribonuclease A

Abstract
Refolding of the very-fast-folding unfolded species (Uvf) of disulfide-intact bovine pancreatic ribonuclease A has been monitored by circular dichroism (CD) at 222 and 275 nm at 0.9 or 2.6 M guanidine hydrochloride, pH 7.0, and 5 °C. The refolding of Uvf represents a purely conformational folding process which is not complicated by cistrans proline isomerization. The data indicate that there are at least two intermediates on the refolding pathway of Uvf and that both intermediates form in the burst phase when the refolding is monitored by CD. At the initiation of folding, Uvf is converted to a largely unfolded intermediate, termed IU, which then undergoes a hydrophobic collapse to form the molten-globule-like intermediate IΦ. The CD values obtained for IU and IΦ indicate that IU has no significant secondary structure and presumably differs from Uvf by a local structural rearrangement, while IΦ has a substantial population of secondary and tertiary structures, about 40%−50% of that of native.