Integrating microarray analysis and the soybean genome to understand the soybeans iron deficiency response
Open Access
- 13 August 2009
- journal article
- Published by Springer Nature in BMC Genomics
- Vol. 10 (1) , 376
- https://doi.org/10.1186/1471-2164-10-376
Abstract
Soybeans grown in the upper Midwestern United States often suffer from iron deficiency chlorosis, which results in yield loss at the end of the season. To better understand the effect of iron availability on soybean yield, we identified genes in two near isogenic lines with changes in expression patterns when plants were grown in iron sufficient and iron deficient conditions.Keywords
This publication has 48 references indexed in Scilit:
- Microarray analysis of iron deficiency chlorosis in near-isogenic soybean linesBMC Genomics, 2007
- PlantTFDB: a comprehensive plant transcription factor databaseNucleic Acids Research, 2007
- Distinct Biphasic mRNA Changes in Response to Asian Soybean Rust InfectionMolecular Plant-Microbe Interactions®, 2007
- Local coexpression domains in the genome of rice show no microsynteny with Arabidopsis domainsPlant Molecular Biology, 2007
- Genome-wide patterns of single-feature polymorphism in Arabidopsis thalianaProceedings of the National Academy of Sciences, 2007
- A Novel Nucleus-Encoded Chloroplast Protein, PIFI, Is Involved in NAD(P)H Dehydrogenase Complex-Mediated Chlororespiratory Electron Transport in ArabidopsisPlant Physiology, 2007
- Phosphorus Stress in Common Bean: Root Transcript and Metabolic ResponsesPlant Physiology, 2007
- MEME: discovering and analyzing DNA and protein sequence motifsNucleic Acids Research, 2006
- High-density haplotyping with microarray-based expression and single feature polymorphism markers in ArabidopsisGenome Research, 2006
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997