The A‐loop, a novel conserved aromatic acid subdomain upstream of the Walker A motif in ABC transporters, is critical for ATP binding
- 22 December 2005
- journal article
- review article
- Published by Wiley in FEBS Letters
- Vol. 580 (4) , 1049-1055
- https://doi.org/10.1016/j.febslet.2005.12.051
Abstract
ATP‐binding cassette (ABC) transporters represent one of the largest families of proteins, and transport a variety of substrates ranging from ions to amphipathic anticancer drugs. The functional unit of an ABC transporter is comprised of two transmembrane domains and two cytoplasmic ABC ATPase domains. The energy of the binding and hydrolysis of ATP is used to transport the substrates across membranes. An ABC domain consists of conserved regions, the Walker A and B motifs, the signature (or C) region and the D, H and Q loops. We recently described the A‐loop (Aromatic residue interacting with the Adenine ring of ATP), a highly conserved aromatic residue ∼25 amino acids upstream of the Walker A motif that is essential for ATP‐binding. Here, we review the mutational analysis of this subdomain in human P‐glycoprotein as well as homology modeling, structural and data mining studies that provide evidence for a functional role of the A‐loop in ATP‐binding in most members of the superfamily of ABC transporters.Keywords
This publication has 38 references indexed in Scilit:
- Adenylate Kinase Activity in ABC TransportersJournal of Biological Chemistry, 2005
- WebLogo: A Sequence Logo Generator: Figure 1Genome Research, 2004
- Molecular Determinants for ATP-binding in Proteins: A Data Mining and Quantum Chemical AnalysisJournal of Molecular Biology, 2004
- RETRACTED: Structure of MsbA from Vibrio cholera: A Multidrug Resistance ABC Transporter Homolog in a Closed ConformationJournal of Molecular Biology, 2003
- Differences between Cystic Fibrosis Transmembrane Conductance Regulator and HisP in the Interaction with the Adenine Ring of ATPPublished by Elsevier ,2000
- Structural Biology of Rad50 ATPaseCell, 2000
- Both ATP Sites of Human P-Glycoprotein Are Essential but Not SymmetricBiochemistry, 1999
- BIOCHEMICAL, CELLULAR, AND PHARMACOLOGICAL ASPECTS OF THE MULTIDRUG TRANSPORTERAnnual Review of Pharmacology and Toxicology, 1999
- ABC Transporters: From Microorganisms to ManAnnual Review of Cell Biology, 1992
- Sequence logos: a new way to display consensus sequencesNucleic Acids Research, 1990