Geological and palaeontological information and phylogenetic hypotheses

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Abstract
A number of workers have accepted the proposition that phylogenetic relations between extant organisms can be determined only by reference to the characters of those organisms. Palaeontological data, it is said, have not been useful for developing or refuting such hypotheses. This view may be tested by reference to the respiratory mechanisms of dipnoans (lungfishes) and amphibians. The structure of the heart, lungs, and circulatory systems has been used by various authors to support the view that these are sister groups. Geological data derived from stratigraphy, palaeoecology, taphonomy, geochemistry and functional morphology of primitive dipnoans is used herein to show that these organisms did not engage in aerial respiration. The first unequivocal evidence that dipnoans had become air breathers is from aestivation burrows in Early Permian rocks of the U.S.A. The Dipnoi must have evolved this capacity at some time between the Early Devonian, when the group became well established, and the Early Permian. Similarities between the respiratory systems of extant dipnoans and amphibians must be the result of convergence, or of the derivation of the Amphibia directly from the Dipnoi. The latter view is not currently accepted by any workers in the field. Thus data from the fossil record are used to demonstrate the invalid use of some neontological data for the development of a phylogenetic hypothesis. Classifications of extant organisms depending on putative shared–derived morphological or physiological characters that cannot be adequately tested for convergence by reference to fossils, must be regarded with due caution.