The polypyrimidine tract binding protein is a monomer
Open Access
- 28 November 2005
- journal article
- Published by Cold Spring Harbor Laboratory in RNA
- Vol. 11 (12) , 1803-1808
- https://doi.org/10.1261/rna.2214405
Abstract
The polypyrimidine tract binding (PTB) protein is a potent regulator of alternative mRNA splicing. It also participates in other essential cellular functions, including translation initiation and polyadenylation. Several published reports have suggested that the protein forms a dimer in solution, a feature that has been widely incorporated into mechanistic models of protein function. However, recent studies have provided indications that full-length PTB is a monomer. Here we present new biophysical and biochemical evidence supporting the monomeric status of the protein. By use of blue-native polyacrylamide gel electrophoresis and size-exclusion chromatography, PTB was observed as a single molecular species under native reducing environments, though in oxidizing conditions, a larger protein species was also detected. Further analyses of wild-type and mutant PTB molecules with SDS-PAGE and time-of-flight electrospray ionization mass spectroscopy confirmed these observations. They also identified the single reduced species as monomeric PTB and the higher-molecular-weight nonreduced species as disulphide-linked PTB dimer mediated by Cys23. Our results indicate that the use of oxidizing environments in previous studies is likely to have contributed to the misassignment of PTB as a dimer. Although purified PTB may form disulphide-linked dimers under these conditions, in the reducing intracellular environment the protein will be monomeric. These findings have implications for the construction of models of PTB function in regulating mRNA metabolism.Keywords
This publication has 30 references indexed in Scilit:
- Polypyrimidine Tract Binding Protein Blocks the 5′ Splice Site-Dependent Assembly of U2AF and the Prespliceosomal E ComplexMolecular Cell, 2005
- The Apaf-1 Internal Ribosome Entry Segment Attains the Correct Structural Conformation for Function via Interactions with PTB and unrMolecular Cell, 2003
- Polypyrimidine tract binding protein and poly r(C) binding protein 1 interact with the BAG-1 IRES and stimulate its activity in vitro and in vivoNucleic Acids Research, 2003
- Cell-specific proteins regulate viral RNA translation and virus-induced diseaseThe EMBO Journal, 2001
- Dynamic Protein Complexes: Insights from Mass SpectrometryPublished by Elsevier ,2001
- Raver1, a dual compartment protein, is a ligand for PTB/hnRNPI and microfilament attachment proteinsThe Journal of cell biology, 2001
- Protein Factor Requirements of the Apaf-1 Internal Ribosome Entry Segment: Roles of Polypyrimidine Tract Binding Protein and upstream of N-rasMolecular and Cellular Biology, 2001
- Structure of tandem RNA recognition motifs from polypyrimidine tract binding protein reveals novel features of the RRM foldThe EMBO Journal, 2000
- Multisite RNA Binding and Release of Polypyrimidine Tract Binding Protein during the Regulation of c-src Neural-Specific SplicingMolecular Cell, 2000
- A brain-enriched polypyrimidine tract-binding protein antagonizes the ability of Nova to regulate neuron-specific alternative splicingProceedings of the National Academy of Sciences, 2000