Low-Energy Tautomers and Conformers of Neutral and Protonated Arginine
- 1 November 2001
- journal article
- research article
- Published by American Chemical Society (ACS) in Journal of the American Chemical Society
- Vol. 123 (47) , 11695-11707
- https://doi.org/10.1021/ja011357l
Abstract
The relative stabilities of zwitterionic and canonical forms of neutral arginine and of its protonated derivative were studied by using ab initio electronic structure methods. Trial structures were first identified at the PM3 level of theory with use of a genetic algorithm to systematically vary geometrical parameters. Further geometry optimizations of these structures were performed at the MP2 and B3LYP levels of theory with basis sets of the 6-31++G** quality. The final energies were determined at the CCSD/6-31++G** level and corrected for thermal effects determined at the B3LYP level. Two new nonzwitterionic structures of the neutral were identified, and one of them is the lowest energy structure found so far. The five lowest energy structures of neutral arginine are all nonzwitterionic in nature and are clustered within a narrow energy range of 2.3 kcal/mol. The lowest energy zwitterion structure is less stable than the lowest nonzwitterion structure by 4.0 kcal/mol. For no level of theory is a zwitterion structure suggested to be the global minimum. The calculated proton affinity of 256.3 kcal/mol and gas-phase basicity of 247.8 kcal/mol of arginine are in reasonable agreement with the measured values of 251.2 and 240.6 kcal/mol, respectively. The calculated vibrational characteristics of the low-energy structures of neutral arginine provide an alternative interpretation of the IR-CRLAS spectrum (Chapo et al. J. Am. Chem. Soc.1998, 120, 12956−12957).Keywords
This publication has 24 references indexed in Scilit:
- Dipole-Bound Anions of Glycine Based on the Zwitterion and Neutral StructuresJournal of the American Chemical Society, 2000
- Theoretical Study of the Tautomeric/Conformational Equilibrium of Aspartic Acid Zwitterions in Aqueous SolutionThe Journal of Physical Chemistry A, 2000
- Absolute Orientation of Molecules of Amphiphilic Alcohols in Crystalline Monolayers at the Air−Water InterfaceThe Journal of Physical Chemistry B, 2000
- On the Stability of Amino Acid Zwitterions in the Gas Phase: The Influence of Derivatization, Proton Affinity, and Alkali Ion AdditionJournal of the American Chemical Society, 2000
- Zwitterionic vs. charge-solvated structures in the binding of arginine to alkali metal ions in the gas phaseThe Analyst, 2000
- Structure of Cationized Arginine (Arg·M+, M = H, Li, Na, K, Rb, and Cs) in the Gas Phase: Further Evidence for Zwitterionic ArginineThe Journal of Physical Chemistry A, 1999
- Is Arginine Zwitterionic or Neutral in the Gas Phase? Results from IR Cavity Ringdown SpectroscopyJournal of the American Chemical Society, 1998
- Salt Bridge Structures in the Absence of Solvent? The Case for the OligoglycinesJournal of the American Chemical Society, 1998
- Conformational potential energy surface of glycine: a theoretical studyJournal of the American Chemical Society, 1991
- Density-functional exchange-energy approximation with correct asymptotic behaviorPhysical Review A, 1988