The consensus concept for thermostability engineering of proteins: further proof of concept
Open Access
- 1 May 2002
- journal article
- research article
- Published by Oxford University Press (OUP) in Protein Engineering, Design and Selection
- Vol. 15 (5) , 403-411
- https://doi.org/10.1093/protein/15.5.403
Abstract
Previously, we calculated a consensus amino acid sequence from 13 homologous fungal phytases. A synthetic gene was constructed and recombinantly expressed. Surprisingly, consensus phytase-1 was 15–26°C more thermostable than all parent phytases used in its design [Lehmann et al. (2000)Protein Eng., 13, 49–57]. In the present study, inclusion of six further phytase sequences in the amino acid sequence alignment resulted in the replacement of 38 amino acid residues in either one or both of the new consensus phytases-10 and -11. Since consensus phytase-10, again, was 7.4°C more thermostable than consensus phytase-1, the thermostability effects of most of the 38 amino acid substitutions were tested by site-directed mutagenesis. Both stabilizing and destabilizing mutations were identified, but all affected the stability of the enzyme by <3°C. The combination of all stabilizing amino acid exchanges in a multiple mutant of consensus phytase-1 increased the unfolding temperature from 78.0 to 88.5°C. Likewise, back-mutation of four destabilizing amino acids and introduction of an additional stabilizing amino acid in consensus phytase-10 further increased the unfolding temperature from 85.4 to 90.4°C. The thermostabilization achieved is the result of a combination of slight improvements from multiple amino acid exchanges rather than being the effect of a single or of just a few dominating mutations that have been introduced by chance. The present findings support the general validity of the consensus concept for thermostability engineering of proteins.Keywords
This publication has 35 references indexed in Scilit:
- Expression, Gene Cloning, and Characterization of Five Novel Phytases from Four Basidiomycete Fungi: Peniophora lycii, Agrocybe pediades , a Ceriporia sp., and Trametes pubescensApplied and Environmental Microbiology, 2001
- Increasing protein stability using a rational approach combining sequence homology and structural alignment: Stabilizing the WW domainProtein Science, 2001
- Combinatorial and computational challenges for biocatalyst designNature, 2001
- Directed Evolution of Thermostable Kanamycin-Resistance Gene: A Convenient Selection Marker for Thermus thermophilusThe Journal of Biochemistry, 1999
- In silico design for protein stabilizationCurrent Opinion in Biotechnology, 1999
- Beyond binding: using phage display to select for structure, folding and enzymatic activity in proteinsCurrent Opinion in Structural Biology, 1999
- Directed evolution of thymidine kinase for AZT phosphorylation using DNA family shufflingNature Biotechnology, 1999
- Directed evolution of a thermostable esteraseProceedings of the National Academy of Sciences, 1998
- A comprehensive set of sequence analysis programs for the VAXNucleic Acids Research, 1984
- Transformation of yeast.Proceedings of the National Academy of Sciences, 1978