Circular dichroism and laser Raman spectroscopic analysis of the secondary structure ofCerebratulus lacteus toxin B-IV
- 1 August 1990
- journal article
- research article
- Published by Springer Nature in Protein Journal
- Vol. 9 (4) , 433-443
- https://doi.org/10.1007/bf01024619
Abstract
The secondary structure ofCerebratulus lacteus toxin B-IV, a neurotoxic polypeptide containing 55 amino acid residues and four disulfide bonds, was experimentally estimated by computer analyses of toxin circular dichroism (CD) and laser Raman spectra. The CD spectrum of the toxin displayed typical α-helical peaks at 191, 208, and 222 nm. At neutralpH, the α-helix estimates from CD varied between 49 and 55%, when nonrepresentative spectrum analytical methods were used. Analysis of the laser Raman spectrum obtained at a much higher toxin concentration yielded a 78% α-helix estimate. Both CD and Raman spectroscopic methods failed to detect any β-sheet structure. The spectroscopic analyses revealed significantly more α-helix and less β-sheet for toxin B-IV than was predicted from its sequence. To account for the difference between the 49–55% helix estimate from CD spectra and the 78% helix estimate from the Raman spectrum, we postulate that some terminal residues are unfolded at the low toxin concentrations used for CD measurements but form helix at the high toxin concentration used for Raman measurements. Our CD observations showing thatCerebatulus toxin B-IV helix content increases about 15% in trifluoroethanol or at highpH are consistent with this interpretation.Keywords
This publication has 56 references indexed in Scilit:
- Circular dichroism studies on conformational transitions of phytohemagglutinins effected by some alcoholsInternational Journal of Peptide and Protein Research, 1982
- An analysis of the prediction of secondary structuresBiochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, 1982
- Determination of the secondary structure of proteins from the amide I band of the laser Raman spectrumJournal of Molecular Biology, 1981
- Conformational preferences of amino acids in globular proteinsBiochemistry, 1978
- Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteinsJournal of Molecular Biology, 1978
- β-turns in proteinsJournal of Molecular Biology, 1977
- Algorithms for prediction of α-helical and β-structural regions in globular proteinsJournal of Molecular Biology, 1974
- Structural principles of the globular organization of protein chains. A stereochemical theory of globular protein secondary structureJournal of Molecular Biology, 1974
- Logical analysis of the mechanism of protein folding: I. Predictions of helices, loops and β-structures from primary structureJournal of Molecular Biology, 1973
- Sequential polypeptides containing S-benzyl-l-cysteinyl and γ-ethyl-l-glutamyl residuesJournal of Molecular Biology, 1965