The Impact of Structural Genomics: Expectations and Outcomes
Top Cited Papers
- 20 January 2006
- journal article
- review article
- Published by American Association for the Advancement of Science (AAAS) in Science
- Vol. 311 (5759) , 347-351
- https://doi.org/10.1126/science.1121018
Abstract
Structural genomics (SG) projects aim to expand our structural knowledge of biological macromolecules while lowering the average costs of structure determination. We quantitatively analyzed the novelty, cost, and impact of structures solved by SG centers, and we contrast these results with traditional structural biology. The first structure identified in a protein family enables inference of the fold and of ancient relationships to other proteins; in the year ending 31 January 2005, about half of such structures were solved at a SG center rather than in a traditional laboratory. Furthermore, the cost of solving a structure at the most efficient SG center in the United States has dropped to one-quarter of the estimated cost of solving a structure by traditional methods. However, the efficiency of the top structural biology laboratories—even though they work on very challenging structures—is comparable to that of SG centers; moreover, traditional structural biology papers are cited significantly more often, suggesting greater current impact.Keywords
This publication has 29 references indexed in Scilit:
- SCOP: A structural classification of proteins database for the investigation of sequences and structuresPublished by Elsevier ,2006
- Giving credit where credit is dueNature Structural & Molecular Biology, 2005
- Structural Genomics, Round 2Science, 2005
- Implications of structural genomics target selection strategies: Pfam5000, whole genome, and random approachesProteins-Structure Function and Bioinformatics, 2004
- The Pfam protein families databaseNucleic Acids Research, 2004
- The Complete Atomic Structure of the Large Ribosomal Subunit at 2.4 Å ResolutionScience, 2000
- The Protein Data BankNucleic Acids Research, 2000
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- Basic Local Alignment Search ToolJournal of Molecular Biology, 1990
- Basic local alignment search toolJournal of Molecular Biology, 1990