Auxin modulates the degradation rate of Aux/IAA proteins

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Abstract
Aux/IAA gene family members were first identified by their rapid transcriptional increase in response to auxin. Auxin/indole-3-acetic acid protein (Aux/IAA) luciferase (LUC) fusions expressed in Arabidopsis under control of a non-auxin-responsive promoter were used to monitor the effect of auxin on protein abundance independent of transcriptional regulation by auxin. After 2 hr in the presence of 1 μM exogenous dichlorophenoxyacetic acid (2,4D), a synthetic auxin, the levels of pea IAA6 (PSIAA6) and Arabidopsis IAA1 LUC activity were 35% and 67%, respectively, of mock-treated genetically identical seedlings, whereas the activity of LUC alone from equivalently treated seedlings remained unaltered. The steady-state level of an Aux/IAA fusion protein lacking domain II, one of the conserved domains found in all Aux/IAA proteins, was not reduced in the presence of auxin. Higher levels of exogenous auxin were required to affect the steady-state level of the PSIAA6∷LUC fusion with a point mutation in domain II. A 13-aa consensus sequence from domain II fused to LUC created an auxin-responsive fusion protein. The change in steady-state levels in response to auxin is extremely rapid, with a decrease in LUC activity detectable by 2 min after auxin application. Direct half-life measurements show that the decrease caused by exogenous auxin is due to the decrease in fusion protein half-life. These results suggest that auxin rapidly modulates the degradation rate of Aux/IAA proteins, with higher levels of auxin increasing the proteolytic rate of Aux/IAA family members.