Finding the Right Questions: Exploratory Pathway Analysis to Enhance Biological Discovery in Large Datasets

This publication has 32 references indexed in Scilit:

• The Systems Biology Graphical Notation
  Nature Biotechnology, 2009
• Error control variability in pathway-based microarray analysis
  Bioinformatics, 2009
• LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data
  Bioinformatics, 2008
• Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists
  Nucleic Acids Research, 2008
• A novel signaling pathway impact analysis
  Bioinformatics, 2008
• Reactome knowledgebase of human biological pathways and processes
  Nucleic Acids Research, 2008
• STRING 8--a global view on proteins and their functional interactions in 630 organisms
  Nucleic Acids Research, 2008
• Taverna: a tool for building and running workflows of services
  Nucleic Acids Research, 2006
• Gene Expression Omnibus: NCBI gene expression and hybridization array data repository
  Nucleic Acids Research, 2002
• KEGG: Kyoto Encyclopedia of Genes and Genomes
  Nucleic Acids Research, 2000