Arrangement of water molecules in cavities and channels of the lattice of [Phe4Val6]antamanide dodecahydrate.
- 1 July 1977
- journal article
- research article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 74 (7) , 2602-2606
- https://doi.org/10.1073/pnas.74.7.2602
Abstract
The synthetic, biologically active, [Phe4Val6] analog of natural antamanide was crystallized from a solution containing calcium nitrate, acetone and acetonitrile. The crystal does not contain any Ca2+ but does contain 12 water molecules per peptide molecule. The conformation of this dodecahydrate is identical to the trihydrate crystallized from n-hexane/methyl acetate. The packing in both crystals is very similar, governed by parallel bands of phenyl and pyrrolidine ring stacking and by continuous channels for the solvent molecules, water in this case and n-hexane/methyl acetate in the previous study. The 2 structures are not ideally isomorphous, since the c cell parameter differs by more than 1.0 .ANG. in the 2 cells. There are 3 functions for H2O molecules: the 3 intrinsic H2O molecules in the interior of the peptide ring, the H2O bound to the exposed C.dbd.O groups and the H2O molecules that fill space in the solvent channels. There are no direct H-bonds between neighboring peptide molecules and there are only 2 intramolecular NH.cntdot..cntdot..cntdot.O.dbd.C bonds (of the 5 .fwdarw. 1 type).This publication has 10 references indexed in Scilit:
- Structure of myoglobin refined at 2·0 Å resolutionJournal of Molecular Biology, 1977
- Conformation of uncomplexed [Phe4, Val6] antamanide crystallized from nonpolar solvents.Proceedings of the National Academy of Sciences, 1976
- “SANDWICH” COMPLEXATION IN CYCLOPEPTIDES AND ITS IMPLICATIONS IN MEMBRANE PROCESSESAnnals of the New York Academy of Sciences, 1975
- Membrane proteins: Amino acid sequence and membrane penetrationJournal of Molecular Biology, 1974
- Conformation of the lithium ion complex of antamanide, a cyclic decapeptide and ion carrier, in the crystalline stateJournal of the American Chemical Society, 1974
- Conformation of the sodium complex of a biologically active analog of antamanide in the crystalline stateBiochemistry, 1974
- Conformations of the Li-Antamanide Complex and Na-[Phe 4 , Val 6 ]Antamanide Complex in the Crystalline StateProceedings of the National Academy of Sciences, 1973
- Approximate treatment of the conformational characteristics of the cyclic deca-L-peptide antamanide and its sodium complex in solutionBiochemistry, 1973
- Antamanide conformations in nonaqueous media. Dependence on hydrogen-bond acceptor properties of solventBiochemistry, 1973
- Über Peptidsynthesen, XXXVIII1)Synthesen des AntamanidsEuropean Journal of Organic Chemistry, 1969