arrayMagic: two-colour cDNA microarray quality control and preprocessing
- 28 September 2004
- journal article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 21 (4) , 554-556
- https://doi.org/10.1093/bioinformatics/bti052
Abstract
ArrayMagic is a software package for quality control and preprocessing of two-colour cDNA microarray data. The automated analysis pipeline comprises data import, normalization, replica merging, quality diagnostics and data export. The script-based processing combines reproducibility and flexibility at high-throughput and provides quality-assured and preprocessed microarray data to high-level follow-up analysis. The R package arrayMagic is available with BSD license at http://www.bioconductor.org a.buness@dkfz.de The package contains documentation in the form of manual pages and a vignette with a guided tour of a typical workflow.Keywords
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