Complete 1H, 13C and 15N NMR assignments and secondary structure of the 269-residue serine protease PB92 from Bacillus alcalophilus
- 1 April 1995
- journal article
- research article
- Published by Springer Nature in Journal of Biomolecular NMR
- Vol. 5 (3) , 259-270
- https://doi.org/10.1007/bf00211753
Abstract
Summary The 1H, 13C and 15N NMR resonances of serine protease PB92 have been assigned using 3D tripleresonance NMR techniques. With a molecular weight of 27 kDa (269 residues) this protein is one of the largest monomeric proteins assigned so far. The side-chain assignments were based mainly on 3D H(C)CH and 3D (H)CCH COSY and TOCSY experiments. The set of assignments encompasses all backbone carbonyl and CHn carbons, all amide (NH and NH2) nitrogens and 99.2% of the amide and CHn protons. The secondary structure and general topology appear to be identical to those found in the crystal structure of serine protease PB92 [Van der Laan et al. (1992) Protein Eng., 5, 405–411], as judged by chemical shift deviations from random coil values, NH exchange data and analysis of NOEs between backbone NH groups.Keywords
This publication has 27 references indexed in Scilit:
- 1H, 13C, and 15N resonance assignments and secondary structure analysis of the HU protein from Bacillus stearothermophilus using two- and three-dimensional double- and triple-resonance heteronuclear magnetic resonance spectroscopyBiochemistry, 1994
- 1H, 13C, and 15N assignments and secondary structure of the FK506 binding protein when bound to ascomycinBiopolymers, 1993
- Protein engineering of the high-alkaline serine protease PB92 from Bacillus alcalophilus: functional and structural consequences of mutation at the S4 substrate binding pocketProtein Engineering, Design and Selection, 1992
- Crystal structure of the high-alkaline serine protease PB92 from Bacillus alcalophilusProtein Engineering, Design and Selection, 1992
- A new 3D HN(CA)HA experiment for obtaining fingerprint HN-Hα cross peaks in15N- and13C-labeled proteinsJournal of Biomolecular NMR, 1992
- 1H-NMR studies of native and fragmented subtilisin CarlsbergBiochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, 1992
- Assignment of the side-chain proton and carbon-13 resonances of interleukin-1.beta. using double- and triple-resonance heteronuclear three-dimensional NMR spectroscopyBiochemistry, 1990
- Molecular dynamics refinement of a thermitase-eglin-c complex at 1.98 Å resolution and comparison of two crystal forms that differ in calcium contentJournal of Molecular Biology, 1989
- Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical featuresBiopolymers, 1983
- Application of phase sensitive two-dimensional correlated spectroscopy (COSY) for measurements of 1H-1H spin-spin coupling constants in proteinsBiochemical and Biophysical Research Communications, 1983