Stable Isotope Labeling of Arabidopsis thaliana for an NMR-Based Metabolomics Approach
Open Access
- 15 August 2004
- journal article
- research article
- Published by Oxford University Press (OUP) in Plant and Cell Physiology
- Vol. 45 (8) , 1099-1104
- https://doi.org/10.1093/pcp/pch117
Abstract
Nuclear magnetic resonance (NMR) will become a key technology in plant metabolomics with the use of stable isotope labeling and advanced hetero-nuclear NMR methodologies. To demonstrate the power of this approach, we performed multi-dimensional hetero-nuclear NMR analysis of metabolic movement of carbon and nitrogen nuclei in Arabidopsis thaliana. First, distinct ethanol-stress response was investigated using 13C-labeled wild type and an ethanol-hypersensitive mutant plants. Furthermore, we followed nitrogen fluxes in 15N-labeled seeds during the initiation of germination in vivo. The future role of stable isotope-labeling combined with advanced hetero-nuclear NMR in plant metabolomics is discussed.Keywords
This publication has 43 references indexed in Scilit:
- IMB1, a bromodomain protein induced during seed imbibition, regulates ABA‐ and phyA‐mediated responses of germination in ArabidopsisThe Plant Journal, 2003
- Factors affecting the robustness of metabolite fingerprinting using 1H NMR spectraPhytochemistry, 2003
- Nontargeted Metabolome Analysis by Use of Fourier Transform Ion Cyclotron Mass SpectrometryOMICS: A Journal of Integrative Biology, 2002
- Metabolomics: quantification of intracellular metabolite dynamicsBiomolecular Engineering, 2002
- Metabolomics – the link between genotypes and phenotypesPlant Molecular Biology, 2002
- Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networksComparative and Functional Genomics, 2001
- Analysis of the genome sequence of the flowering plant Arabidopsis thalianaNature, 2000
- Metabolite profiling for plant functional genomicsNature Biotechnology, 2000
- NMRPipe: A multidimensional spectral processing system based on UNIX pipesJournal of Biomolecular NMR, 1995
- Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopyChemical Physics Letters, 1980