Practical aspects of imputation-driven meta-analysis of genome-wide association studies
Top Cited Papers
- 15 October 2008
- journal article
- review article
- Published by Oxford University Press (OUP) in Human Molecular Genetics
- Vol. 17 (R2) , R122-R128
- https://doi.org/10.1093/hmg/ddn288
Abstract
Motivated by the overwhelming success of genome-wide association studies, droves of researchers are working vigorously to exchange and to combine genetic data to expediently discover genetic risk factors for common human traits. The primary tools that fuel these new efforts are imputation, allowing researchers who have collected data on a diversity of genotype platforms to share data in a uniformly exchangeable format, and meta-analysis for pooling statistical support for a genotype-phenotype association. As many groups are forming collaborations to engage in these efforts, this review collects a series of guidelines, practical detail and learned experiences from a variety of individuals who have contributed to the subject.Keywords
This publication has 40 references indexed in Scilit:
- Heterogeneity in Meta-Analyses of Genome-Wide Association InvestigationsPLOS ONE, 2007
- PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage AnalysesAmerican Journal of Human Genetics, 2007
- New models of collaboration in genome-wide association studies: the Genetic Association Information NetworkNature Genetics, 2007
- Imputation-Based Analysis of Association Studies: Candidate Regions and Quantitative TraitsPLoS Genetics, 2007
- A new multipoint method for genome-wide association studies by imputation of genotypesNature Genetics, 2007
- Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controlsNature, 2007
- Replicating genotype–phenotype associationsNature, 2007
- A Genome-Wide Association Study of Type 2 Diabetes in Finns Detects Multiple Susceptibility VariantsScience, 2007
- Population Structure and EigenanalysisPLoS Genetics, 2006
- Genomic Control for Association StudiesBiometrics, 1999