Colletotrichum – current status and future directions
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Open Access
- 1 September 2012
- journal article
- Published by Westerdijk Fungal Biodiversity Institute in Studies in Mycology
- Vol. 73 (1) , 181-213
- https://doi.org/10.3114/sim0014
Abstract
A review is provided of the current state of understanding of Colletotrichum systematics, focusing on species-level data and the major clades. The taxonomic placement of the genus is discussed, and the evolution of our approach to species concepts and anamorph-teleomorph relationships is described. The application of multilocus technologies to phylogenetic analysis of Colletotrichum is reviewed, and selection of potential genes/loci for barcoding purposes is discussed. Host specificity and its relation to speciation and taxonomy is briefly addressed. A short review is presented of the current status of classification of the species clusters that are currently without comprehensive multilocus analyses, emphasising the orbiculare and destructivum aggregates. The future for Colletotrichum biology will be reliant on consensus classification and robust identification tools. In support of these goals, a Subcommission on Colletotrichum has been formed under the auspices of the International Commission on Taxonomy of Fungi, which will administer a carefully curated barcode database for sequence-based identification of species within the BioloMICS web environment.Keywords
This publication has 243 references indexed in Scilit:
- New molecular markers for fungal phylogenetics: Two genes for species-level systematics in the Sordariomycetes (Ascomycota)Molecular Phylogenetics and Evolution, 2012
- Fusion of two divergent fungal individuals led to the recent emergence of a unique widespread pathogen speciesProceedings of the National Academy of Sciences, 2012
- Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for FungiProceedings of the National Academy of Sciences, 2012
- Colletotrichum truncatum: an Unusual Pathogen Causing Mycotic Keratitis and EndophthalmitisJournal of Clinical Microbiology, 2011
- A locus conferring resistance to Colletotrichum higginsianum is shared by four geographically distinct Arabidopsis accessionsThe Plant Journal, 2009
- TheColletotrichum orbiculare ssd1Mutant EnhancesNicotiana benthamianaBasal Resistance by Activating a Mitogen-Activated Protein Kinase PathwayPlant Cell, 2009
- Moelleriella zhongdongii: stroma development and identification of hirsutella-like and Aschersonia synanamorphsMycological Research, 2009
- Atg26-Mediated Pexophagy Is Required for Host Invasion by the Plant Pathogenic Fungus Colletotrichum orbicularePlant Cell, 2009
- Prospects for fungus identification usingCO1DNA barcodes, withPenicilliumas a test caseProceedings of the National Academy of Sciences, 2007
- Assessing the effect of varying sequence length on DNA barcoding of fungiMolecular Ecology Notes, 2007