Empirical Analysis of Protein Insertions and Deletions Determining Parameters for the Correct Placement of Gaps in Protein Sequence Alignments
- 1 August 2004
- journal article
- research article
- Published by Elsevier in Journal of Molecular Biology
- Vol. 341 (2) , 617-631
- https://doi.org/10.1016/j.jmb.2004.05.045
Abstract
No abstract availableKeywords
This publication has 35 references indexed in Scilit:
- Identification of common molecular subsequencesPublished by Elsevier ,2004
- Multiple sequence alignment with the Clustal series of programsNucleic Acids Research, 2003
- Recent progress in multiple sequence alignment: a surveyPharmacogenomics, 2001
- T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. ThorntonJournal of Molecular Biology, 2000
- COFFEE: an objective function for multiple sequence alignments.Bioinformatics, 1998
- SAGA: sequence alignment by genetic algorithmNucleic Acids Research, 1996
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research, 1994
- Exhaustive Matching of the Entire Protein Sequence DatabaseScience, 1992
- Multiple sequence alignment with hierarchical clusteringNucleic Acids Research, 1988
- A general method applicable to the search for similarities in the amino acid sequence of two proteinsJournal of Molecular Biology, 1970