Similarities and Differences between Cobalamins and Cobaloximes. Accurate Structural Determination of Methylcobalamin and of LiCl- and KCl-Containing Cyanocobalamins by Synchrotron Radiation
- 6 July 2000
- journal article
- Published by American Chemical Society (ACS) in Inorganic Chemistry
- Vol. 39 (15) , 3403-3413
- https://doi.org/10.1021/ic0001199
Abstract
The accurate crystal structure determinations of MeCbl (1), CNCbl·2LiCl (2), and CNCbl·KCl (3), based on synchrotron diffraction data collected at 100 K and using high-quality single crystals, are reported. Refinements gave R1 indices of 0.0834 (1), 0.0434 (2), and 0.0773 (3). The influence of the water of crystallization and ion content on the crystal packing of these and other cobalamins (XCbl) is discussed, and a relationship between the crystal packing and the corrin side chain conformations is presented. An analysis of the bond lengths within the corrin moiety, based on 13 accurate structures with several X groups, shows that the trend of the C−C and C−N distances can be interpreted in terms of electronic and steric factors. The variation in structural, NMR and IR spectroscopic, and electrochemical properties are compared with those of cobaloximes, the B12 model, when X is varied. This comparison indicates that the π-back-donation from metal to the CN axial ligand and the transmission of the trans influence of the X ligand are more effective in cobalamins than in cobaloximes. These findings are consistent with a significantly greater availability of electron charge on Co in cobalamins, and, hence, a semiquantitative evaluation of the electronic difference between the cobalt centers in the two systems is allowed.Keywords
This publication has 25 references indexed in Scilit:
- Crystal Chemistry of Cobalamins. Structural Characterization of the Co−S Bond in CobalaminsInorganic Chemistry, 1999
- Difluoromethylcobalamin: Structural Aspects of an Old Tree with a New BranchInorganic Chemistry, 1999
- Structural and computational analysis of published neutron diffraction data show that crystalline vitamin B12 coenzyme contains a strong intramolecular N-H...Ph hydrogen bondActa crystallographica Section B, Structural science, crystal engineering and materials, 1998
- [20] Processing of X-ray diffraction data collected in oscillation modePublished by Elsevier ,1997
- High-resolution neutron study of vitamin B12 coenzyme at 15 K: solvent structureActa crystallographica Section B, Structural science, crystal engineering and materials, 1994
- Quantitative rationalization of solution and solid state properties in cobaloximes, RCo(DH)2L, as a function of the electronic and steric properties of RInorganic Chemistry, 1994
- Low-temperature crystal structure of superoxocobalamin obtained by solid-state oxygenation of the B12 derivative cob(II)alaminJournal of the American Chemical Society, 1991
- Providing one-carbon units for biological methylations: mechanistic studies on serine hydroxymethyltransferase, methylenetetrahydrofolate reductase, and methyltetrahydrofolate-homocysteine methyltransferaseChemical Reviews, 1990
- Electrochemistry of vitamin B12. 3. One-electron intermediates in the reduction of methylcobalamin and methylcobinamideJournal of the American Chemical Society, 1978
- Propanediol dehydratase system. Role of monovalent cations in binding of vitamin B12 coenzyme or its analogs to apoenzymeBiochemistry, 1971