Clann: investigating phylogenetic information through supertree analyses
Open Access
- 16 September 2004
- journal article
- research article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 21 (3) , 390-392
- https://doi.org/10.1093/bioinformatics/bti020
Abstract
Summary: Clann has been developed in order to provide methods of investigating phylogenetic information through the application of supertrees. Availability: Clann has been precompiled for Linux, Apple Macintosh and Windows operating systems and is available from http://bioinf.may.ie/software/clann. Source code is available on request from the authors. Supplementary information: Clann has been written in the C programming language. Source code is available on request. Contact:chris.creevey@may.ieKeywords
This publication has 13 references indexed in Scilit:
- Does a tree–like phylogeny only exist at the tips in the prokaryotes?Proceedings Of The Royal Society B-Biological Sciences, 2004
- Some Desiderata for Liberal SupertreesPublished by Springer Nature ,2004
- Matrix Representations with Parsimony or with Distances: Two Sides of the Same Coin?Systematic Biology, 2003
- The (Super)Tree of Life: Procedures, Problems, and ProspectsAnnual Review of Ecology and Systematics, 2002
- A composite estimate of primate phylogenyPhilosophical Transactions Of The Royal Society B-Biological Sciences, 1995
- Combining trees as a way of combining data sets for phylogenetic inference, and the desirability of combining gene treesTaxon, 1992
- Matrix representation in reconstructing phylogenetic relationships among the eukaryotesBiosystems, 1992
- COULD A CLADOGRAM THIS SHORT HAVE ARISEN BY CHANCE ALONE?: ON PERMUTATION TESTS FOR CLADISTIC STRUCTURECladistics, 1991
- A Randomization Test for Phylogenetic Information in Systematic DataSystematic Zoology, 1989
- Bootstrap Methods: Another Look at the JackknifeThe Annals of Statistics, 1979