SEQOPTICS: a protein sequence clustering system
Open Access
- 12 December 2006
- journal article
- research article
- Published by Springer Nature in BMC Bioinformatics
- Vol. 7 (S4) , S10
- https://doi.org/10.1186/1471-2105-7-S4-S10
Abstract
Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering algorithms have been applied. OPTICS (Ordering Points To Identify the Clustering Structure) is an attractive approach due to its emphasis on visualization of results and support for interactive work, e.g., in choosing parameters. However, OPTICS has not been used, as far as we know, for protein sequence clustering.Keywords
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