Primary and secondary structure of black beetle virus RNA2, the genomic messenger for BBV coat protein precursor
- 1 January 1984
- journal article
- Published by Oxford University Press (OUP) in Nucleic Acids Research
- Vol. 12 (18) , 7215-7223
- https://doi.org/10.1093/nar/12.18.7215
Abstract
The nucleotide sequence of black beetle virion (BBV) RNA2 has been determined. RNA2 is 1399 b long. Its 5' terminus is capped. Its 3' terminus has an unidentified moiety that renders the RNA resistent to polyadenylation and ligation. The first AUG codon at base 23 is followed by an open reading frame for a protein 407 amino acids long, the predicted size of coat protein precursor. A second open reading frame for a putative protein 72 amino acid residues long begins at base 1110. No other large open reading frames exist. The 5' half of the RNA can be folded into a long, imperfect hairpin of high predicted stability. The 3' half of the RNA can fold into a complex set of multiply bifurcated stem and loop regions.Keywords
This publication has 22 references indexed in Scilit:
- Complete nucleotide sequences of the coat protein messenger RNAs of brome mosaic virus and cowpea chlorotic mottle virusNucleic Acids Research, 1982
- Complete nucleotide sequence of brome mosaic virus RNA3Journal of Molecular Biology, 1981
- Near identity of 3′ RNA secondary structure in bromoviruses and cucumber mosaic virusCell, 1981
- Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomesNucleic Acids Research, 1981
- Phy M: an RNase activity specific for U and A residues useful in RNA sequence analysisNucleic Acids Research, 1980
- Sequence of an oligonucleotide derived from the 3' end of each of the four brome mosaic viral RNAs.Proceedings of the National Academy of Sciences, 1977
- Utilization of the guanylyltransferase and methyltransferases of vaccinia virus to modify and identify the 5′-terminals of heterologous RNA speciesBiochemical and Biophysical Research Communications, 1977
- Addition by ATP : RNA adenylyltransferase from Escherichia coli of 3′-linked oligo(A) to bacteriophage Qβ RNA and its effect on RNA replicationBiochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis, 1976
- A Small RNA Virus with a Divided Genome from Heteronychus arator (F.) [Coleoptera: Scarabaeidae]Journal of General Virology, 1976
- A two-dimensional fractionation procedure for radioactive nucleotidesJournal of Molecular Biology, 1965