Base stacking in cytosine dimer. A comparison of correlatedab initio calculations with three empirical potential models and density functional theory calculations
- 1 May 1996
- journal article
- research article
- Published by Wiley in Journal of Computational Chemistry
- Vol. 17 (7) , 841-850
- https://doi.org/10.1002/(sici)1096-987x(199605)17:7<841::aid-jcc8>3.0.co;2-s
Abstract
No abstract availableKeywords
This publication has 61 references indexed in Scilit:
- Interaction Between the Guanine Amino Group and the Adenine Six Membered Ring Stabilizes the Unusual Conformation of the CpA Step in B-DNANucleosides and Nucleotides, 1994
- Sequence-dependent DNA StructureJournal of Molecular Biology, 1993
- Ab initio molecular orbital calculations of DNA bases and their radical ions in various protonation states: evidence for proton transfer in GC base pair radical anionsThe Journal of Physical Chemistry, 1992
- Different intrastrand and interstrand contributions to stacking account for roll variations at the alternating purine-pyrimidine sequences in A-DNA and A-RNAJournal of Molecular Biology, 1991
- The influence of Li+, Na+, Mg2+, Ca2+, and Zn2+ ions on the hydrogen bonds of the Watson–Crick base pairsBiopolymers, 1990
- Crystallographic study of one turn of G/C-rich B-DNAJournal of Molecular Biology, 1989
- Intermolecular interactions between medium-sized systems. Nonempirical and empirical calculations of interaction energies. Successes and failuresChemical Reviews, 1988
- An ab initio molecular orbital study on the sequence-dependency of DNA conformation: An evaluation of intra- and inter-strand stacking interaction energyJournal of Theoretical Biology, 1988
- Base sequence and helix structure variation in B and A DNAJournal of Molecular Biology, 1983
- Quantum mechanical study of bases interactions in various associates in atomic dipole approximationJournal of Theoretical Biology, 1976