Epistasis correlates to genomic complexity
- 26 September 2006
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 103 (39) , 14402-14405
- https://doi.org/10.1073/pnas.0604543103
Abstract
Whether systematic genetic interactions (epistasis) occur at the genomic scale remains a challenging topic in evolutionary biology. Epistasis should make a significant contribution to variation in complex traits and influence the evolution of genetic systems as sex, diploidy, dominance, or the contamination of genomes with deleterious mutations. We have collected data from widely different organisms and quantified epistasis in a common, per-generation scale. Simpler genomes, such as those of RNA viruses, display antagonistic epistasis (mutations have smaller effects together than expected); bacterial microorganisms do not apparently deviate from independent effects, whereas in multicellular eukaryotes, a transition toward synergistic epistasis occurs (mutations have larger effects together than expected). We propose that antagonistic epistasis might be a property of compact genomes with few nonpleiotropic biological functions, whereas in complex genomes, synergism might emerge from mutational robustness.Keywords
This publication has 55 references indexed in Scilit:
- Genomic buffering mitigates the effects of deleterious mutations in bacteriaNature Genetics, 2005
- Distributed robustness versus redundancy as causes of mutational robustnessBioEssays, 2005
- Modular epistasis in yeast metabolismNature Genetics, 2004
- Evidence for Positive Epistasis in HIV-1Science, 2004
- Evolution of Robustness in Digital OrganismsArtificial Life, 2004
- TESTING FOR EPISTASIS BETWEEN DELETERIOUS MUTATIONS IN A PARASITOID WASPEvolution, 2003
- Interaction between directional epistasis and average mutational effectsProceedings Of The Royal Society B-Biological Sciences, 2001
- FACTORS AFFECTING THE GENETIC LOAD IN DROSOPHILA: SYNERGISTIC EPISTASIS AND CORRELATIONS AMONG FITNESS COMPONENTSEvolution, 2000
- High Frequency of Cryptic Deleterious Mutations in Caenorhabditis elegansScience, 1999
- Test of Interaction Between Genetic Markers That Affect Fitness in Aspergillus nigerEvolution, 1997