Recent Evolutions of Multiple Sequence Alignment Algorithms
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Open Access
- 31 August 2007
- journal article
- review article
- Published by Public Library of Science (PLoS) in PLoS Computational Biology
- Vol. 3 (8) , e123
- https://doi.org/10.1371/journal.pcbi.0030123
Abstract
No abstract availableKeywords
This publication has 33 references indexed in Scilit:
- MUMMALS: multiple sequence alignment improved by using hidden Markov models with local structural informationNucleic Acids Research, 2006
- Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-CoffeeNucleic Acids Research, 2006
- Kalign, Kalignvu and Mumsa: web servers for multiple sequence alignmentNucleic Acids Research, 2006
- MAFFT version 5: improvement in accuracy of multiple sequence alignmentNucleic Acids Research, 2005
- 3DCoffee: Combining Protein Sequences and Structures within Multiple Sequence AlignmentsJournal of Molecular Biology, 2004
- FUGUE: sequence-structure homology recognition using environment-specific substitution tables and structure-dependent gap penalties11Edited by B. HonigJournal of Molecular Biology, 2001
- T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. ThorntonJournal of Molecular Biology, 2000
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research, 1994
- Protein structure alignmentJournal of Molecular Biology, 1989
- Identification of protein sequence homology by consensus template alignmentJournal of Molecular Biology, 1986