The Lubricant of Life: A Proposal That Solvent Water Promotes Extremely Fast Conformational Fluctuations in Mobile Heteropolypeptide Structure
- 1 October 1997
- journal article
- review article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 36 (43) , 13143-13147
- https://doi.org/10.1021/bi971323j
Abstract
Recent observations using the novel technique of Raman optical activity suggest that individual residues in unfolded proteins and in disordered loop regions of molten globule-like states cluster in the α-helix, β-structure, and PPII-helix regions of the Ramachandran surface and that they “flicker” between these regions at rates ∼1012 s-1 at room temperature. It is proposed that these rapid motions, which occur on the same picosecond time scale as rearrangements of the hydrogen bond network in bulk water, are promoted by solvent water molecules via a repertoire of transient hydrated reverse turn conformations. Some implications of this proposal for protein folding and function are discussed.Keywords
This publication has 6 references indexed in Scilit:
- How Floppy Modes Give Rise to Adsorption Sites in ZeolitesPhysical Review Letters, 1997
- On Protein Denaturation in Aqueous−Organic Mixtures but Not in Pure Organic SolventsJournal of the American Chemical Society, 1996
- 310 Helixes in Peptides and Proteins As Studied by Modified Zimm-Bragg TheoryJournal of the American Chemical Society, 1995
- Fluctuation, relaxations, and hydration in liquid water. Hydrogen-bond rearrangement dynamicsChemical Reviews, 1993
- Theoretical evidence for destabilization of an .alpha.-helix by water insertion: molecular dynamics of hydrated decaalanineJournal of the American Chemical Society, 1990
- A simplified representation of protein conformations for rapid simulation of protein foldingJournal of Molecular Biology, 1976