Chromatin remodeling by DNA bending, not twisting
- 26 January 2005
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 102 (5) , 1329-1332
- https://doi.org/10.1073/pnas.0409413102
Abstract
Single-stranded regions (gaps) in nucleosomal DNA interfere with action of the RSC chromatin-remodeling complex, monitored by exposure of restriction endonuclease cutting sites. Single-strand breaks (nicks) in the DNA, by contrast, have no effect. Gaps on one side of the cutting site are inhibitory, but gaps on the other side are not. A gap >100 bp from the cutting site is as effective as a gap <20 bp from the site. These findings suggest a remodeling process involving bending, but not twisting, of the DNA and further point to the propagation of a bent region (loop or bulge) from one end of the nucleosome to the other.Keywords
This publication has 20 references indexed in Scilit:
- Spontaneous Sharp Bending of Double-Stranded DNAMolecular Cell, 2004
- SWI/SNF Unwraps, Slides, and Rewraps the NucleosomeMolecular Cell, 2003
- Isolation and Assay of the RSC Chromatin-Remodeling Complex from Saccharomyces cerevisiaePublished by Elsevier ,2003
- hSWI/SNF-Catalyzed Nucleosome Sliding Does Not Occur Solely via a Twist-Diffusion MechanismMolecular and Cellular Biology, 2002
- Chromatin remodeling by RSC involves ATP-dependent DNA translocationGenes & Development, 2002
- ISWI Induces Nucleosome Sliding on Nicked DNAMolecular Cell, 2001
- Polymer Reptation and Nucleosome RepositioningPhysical Review Letters, 2001
- Generation of Superhelical Torsion by ATP-Dependent Chromatin Remodeling ActivitiesCell, 2000
- Nucleosome Movement by CHRAC and ISWI without Disruption or trans-Displacement of the Histone OctamerCell, 1999
- Relation of Nucleosomes to DNA SequencesPublished by Cold Spring Harbor Laboratory ,1978