Coupled Two-Way Clustering Analysis of Breast Cancer and Colon Cancer Gene Expression Data

Preprint

17 June 2002

preprint
Published by arXiv in arXiv

https://doi.org/10.48550/arXiv.physics/0206060

Abstract

We present and review Coupled Two Way Clustering, a method designed to mine gene expression data. The method identifies submatrices of the total expression matrix, whose clustering analysis reveals partitions of samples (and genes) into biologically relevant classes. We demonstrate, on data from colon and breast cancer, that we are able to identify partitions that elude standard clustering analysis.

Keywords

CLUSTERING ANALYSIS
EXPRESSION DATA
GENE EXPRESSION
BREAST CANCER
COLON CANCER
COUPLED TWO
PARTITIONS

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Version 1, 2002-06-17, ArXiv

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