Aliphatic semisynthetic variants of the amino-terminal residue of sperm whale myoglobin: enrichment with carbon-13 and determination and interpretation of terminal pK values
- 1 November 1985
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 24 (23) , 6707-6716
- https://doi.org/10.1021/bi00344a061
Abstract
The synthesis of a series of myoglobins substituted in the amino-terminal residue to provide variation in the aliphatic nature of the side chain and enrichment in 13C was accomplished by semisynthetic methods. The replacements for valine, the native first residue, included 13C-enriched glycine, alanine, valine, leucine, and isoleucine. The products were extensively characterized and found to be virtually indistinguishable by most physical methods. 13C NMR spectroscopy showed significant differences in the amino-terminal pK value, ranging from 7.72 for [Gly1]myoglobin to 7.15 for [Leu1)myoglobin. Consideration of the electrostatic effects of the charge matrix indicated a balance of interactions at this site not significantly altered by these variations in the side chain. By examination of the crystal structure, consideration of earlier work regarding the interactions of the side chain of Leu-2, and data regarding the motions of the terminal residue, it was concluded that the interaction of the side chain of the first residue with the hydrophobic cluster formed primarily by close contact of invariant residues Leu-2 and Leu-137 was the primary cause for the reduction in terminal pK values seen for the larger aliphatics. By restricting the freedom of the residue, this interaction limits the available hydration volume and consequently favors the unprotonated form of the amine. The concurrent observation of both functional elements in the series of .alpha.-amino-terminal residues brings out the interrelated consequences for the two categories of solvent interactions controlling structural and functional properties in a graded way.This publication has 20 references indexed in Scilit:
- A preliminary comparison of metmyoglobin molecules from seal and sperm whaleJournal of Molecular Biology, 1978
- X-ray crystallographic studies of seal myoglobinJournal of Molecular Biology, 1978
- Stabilizing effect of various organic solvents on protein.Journal of Biological Chemistry, 1978
- Water structure in a protein crystal: Rubredoxin at 1.2 Å resolutionJournal of Molecular Biology, 1978
- Quantitative determination of carbamino adducts of alpha and beta chains in human adult hemoglobin in presence and absence of carbon monoxide and 2,3-diphosphoglycerate.Journal of Biological Chemistry, 1977
- Structure of myoglobin refined at 2·0 Å resolutionJournal of Molecular Biology, 1977
- A comparison of sulfonated phenylisothiocyanates for reducing losses of lysine-containing peptides during automated sequencingAnalytical Biochemistry, 1976
- The nature of the accessible and buried surfaces in proteinsJournal of Molecular Biology, 1976
- COMPARISON OF MYOGLOBINS FROM HARBOR SEAL PORPOISE AND SPERM WHALE .2. REACTIVITY TOWARD HYDROGEN ION AND CUPRIC ION1968
- Reactivity of Sperm Whale Metmyoglobin towards Hydrogen Ions and p-Nitrophenyl AcetateJournal of Biological Chemistry, 1962