Efficient Construction of Reversible Jump Markov Chain Monte Carlo Proposal Distributions
Top Cited Papers
Open Access
- 28 January 2003
- journal article
- Published by Oxford University Press (OUP) in Journal of the Royal Statistical Society Series B: Statistical Methodology
- Vol. 65 (1) , 3-39
- https://doi.org/10.1111/1467-9868.03711
Abstract
Summary: The major implementational problem for reversible jump Markov chain Monte Carlo methods is that there is commonly no natural way to choose jump proposals since there is no Euclidean structure in the parameter space to guide our choice. We consider mechanisms for guiding the choice of proposal. The first group of methods is based on an analysis of acceptance probabilities for jumps. Essentially, these methods involve a Taylor series expansion of the acceptance probability around certain canonical jumps and turn out to have close connections to Langevin algorithms. The second group of methods generalizes the reversible jump algorithm by using the so-called saturated space approach. These allow the chain to retain some degree of memory so that, when proposing to move from a smaller to a larger model, information is borrowed from the last time that the reverse move was performed. The main motivation for this paper is that, in complex problems, the probability that the Markov chain moves between such spaces may be prohibitively small, as the probability mass can be very thinly spread across the space. Therefore, finding reasonable jump proposals becomes extremely important. We illustrate the procedure by using several examples of reversible jump Markov chain Monte Carlo applications including the analysis of autoregressive time series, graphical Gaussian modelling and mixture modelling.Keywords
Funding Information
- European Union training and mobility (ERB-FMRX-CT96-0095)
- Engineering and Physical Sciences Research Council (AF/000537)
This publication has 24 references indexed in Scilit:
- Bayesian Analysis: A Look at Today and Thoughts of TomorrowJournal of the American Statistical Association, 2000
- Bayesian Modelling of Prehistoric Corbelled DomesJournal of the Royal Statistical Society: Series D (The Statistician), 2000
- Bayesian analysis of mixture models with an unknown number of components—an alternative to reversible jump methodsThe Annals of Statistics, 2000
- Priors and Component Structures in Autoregressive Time Series ModelsJournal of the Royal Statistical Society Series B: Statistical Methodology, 1999
- Perfect simulation in stochastic geometryPattern Recognition, 1999
- Markov chain Monte Carlo model determination for hierarchical and graphical log-linear modelsBiometrika, 1999
- Miscellanea. On quantile estimation and Markov chain Monte Carlo convergenceBiometrika, 1999
- A note on Metropolis-Hastings kernels for general state spacesThe Annals of Applied Probability, 1998
- Reversible jump Markov chain Monte Carlo computation and Bayesian model determinationBiometrika, 1995
- Optimum Monte-Carlo sampling using Markov chainsBiometrika, 1973