Exponential growth by cross-catalytic cleavage of deoxyribozymogens
- 12 May 2003
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 100 (11) , 6416-6421
- https://doi.org/10.1073/pnas.1130145100
Abstract
We have designed an autocatalytic cycle based on the highly efficient 10-23 RNA-cleaving deoxyribozyme that is capable of exponential amplification of catalysis. In this system, complementary 10-23 variants were inactivated by circularization, creating deoxyribozymogens. Upon linearization, the enzymes can act on their complements, creating a cascade in which linearized species accumulate exponentially. Seeding the system with a pool of linear catalysts resulted not only in amplification of function but in sequence selection and represents an in vitro selection experiment conducted in the absence of any protein enzymes.Keywords
This publication has 35 references indexed in Scilit:
- DNA in a material worldNature, 2003
- Protein detection using proximity-dependent DNA ligation assaysNature Biotechnology, 2002
- A General Strategy for Effector-mediated Control of RNA-cleaving Ribozymes and DNA EnzymesJournal of Molecular Biology, 2002
- Programmable and autonomous computing machine made of biomoleculesNature, 2001
- A novel mode of regulation of an RNA-cleaving DNAzyme by effectors that bind to both enzyme and substrateJournal of Molecular Biology, 2001
- A molecular predator and its prey: coupled isothermal amplification of nucleic acidsChemistry & Biology, 1997
- Chemical self-replication of palindromic duplex DNANature, 1994
- A Self‐Replicating System from Three Starting MaterialsAngewandte Chemie International Edition in English, 1993
- Parabolic Growth of a Self‐Replicating Hexadeoxynucleotide Bearing a 3'‐5'‐Phosphoamidate LinkageAngewandte Chemie International Edition in English, 1991
- Template-directed synthesis on the pentanucleotide CpCpGpCpCJournal of Molecular Biology, 1984