The PRIDE server for protein three-dimensional similarity
- 18 September 2002
- journal article
- Published by International Union of Crystallography (IUCr) in Journal of Applied Crystallography
- Vol. 35 (5) , 648-649
- https://doi.org/10.1107/s002188980201292x
Abstract
The PRIDE server is an implementation of thePRIDEalgorithm that compares protein three-dimensional structures in terms of their Cαdistance distributions. In response to queries presented as single or concatenated Protein Data Bank (PDB) files, the server can carry out (i) a pairwise comparison of two protein three-dimensional structures, (ii) a structural clustering of protein three-dimensional structures, providing a distance matrix and a dendrogram as an output; and (iii) a similarity search with a protein domain structure query against the CATH database.Keywords
This publication has 0 references indexed in Scilit: