On the ion selectivity in Ca-binding proteins: the cyclo(-L-Pro-Gly-)3 peptide as a model.
- 1 October 1989
- journal article
- research article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 86 (20) , 7880-7884
- https://doi.org/10.1073/pnas.86.20.7880
Abstract
Calcium plays a crucial role in many cellular processes. Its functions are directely dependent on the high specificity for Ca2+ exhibited by the proteins and ion carriers that bind divalent ions. To elucidate the basis for this specificity we have calculated the relative energies of solvation of calcium and magnesium ions in complexes with cyclo(-L-Pro-Gly-)3, a small synthetic peptide that binds Ca2+ with an affinity comparable to those of the naturally occurring proteins. The results show that the ion selectivity of the peptide resides in the difference in the solvation energies of the competing ions in water. Although the peptide is able to complex Mg2+ better than Ca2+ in the stoichiometries in which cyclo(-L-Pro-Gly-)3 binds divalent ions, it is not always able to provide as much stabilization for Mg2+ as water does. These results also explain why cyclo(-L-Pro-Gly-)3 binds Ca2+ and Mg2+ with different stoichiometries and indicate the source for expected differences in the structures of the complexes of the two ions.This publication has 17 references indexed in Scilit:
- Structural and energetic parameters of Ca2+ binding to peptides and proteinsBiopolymers, 1988
- Refined crystal structure of troponin C from turkey skeletal muscle at 2·0 Å resolutionJournal of Molecular Biology, 1988
- Structure-function relationships in EF-hand calcium-binding proteins. Protein engineering and biophysical studies of calbindin D9kBiochemistry, 1987
- Is the binding of magnesium(II) to calmodulin significant? An investigation by magnesium-25 nuclear magnetic resonanceBiochemistry, 1987
- Free Energy Calculations by Computer SimulationScience, 1987
- Calculation of the Relative Change in Binding Free Energy of a Protein-Inhibitor ComplexScience, 1987
- Free energy of charges in solvated proteins: microscopic calculations using a reversible charging processBiochemistry, 1986
- Toward computer-aided site-directed mutagenesis of enzymes.Proceedings of the National Academy of Sciences, 1986
- Theoretical calculation of relative binding affinity in host-guest systems.Proceedings of the National Academy of Sciences, 1986
- Structure of the calcium regulatory muscle protein troponin-C at 2.8 Å resolutionNature, 1985