Phase diagram of a model protein derived by exhaustive enumeration of the conformations
- 15 July 1994
- journal article
- research article
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 101 (2) , 1444-1451
- https://doi.org/10.1063/1.467769
Abstract
An understanding of the various states available to a polypeptide chain is important for a description of the protein folding process. We use a 16‐monomer chain on a two‐dimensional square lattice to model a protein. This makes it possible to enumerate all self‐avoiding conformations from which any equilibrium thermodynamic quantity can be calculated. By varying the external conditions of temperature and average attraction, we construct a phase diagram for the model protein. It is found to have an extended coil state, a homopolymer‐like disorganized globule state, and an organized frozen globule state that corresponds to the lowest energy (native) conformation. The exact model results agree well with analytical heteropolymer theory.Keywords
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