The portable parallel implementation of two novel mathematical biology algorithms in ZPL

Abstract
This paper shows that mathematical models of biologicalpattern formation are ideally suited to data parallelism.We present two new algorithms, one for simulatingthe dynamic structure of fibroblasts, and the otherfor studying the self-organization of motile bacteria.We describe implementations of these algorithms usinga high level data parallel language called ZPL, andwe give performance results for the Kendall Square ResearchKSR-2 and the Intel Paragon that include comparisonsagainst...

This publication has 0 references indexed in Scilit: