Effect of base mismatch on the electronic properties of DNA–DNA and LNA–DNA double strands: Density-functional theoretical calculations
- 1 September 2007
- journal article
- Published by Elsevier in Chemical Physics Letters
- Vol. 446 (1-3) , 151-158
- https://doi.org/10.1016/j.cplett.2007.07.095
Abstract
No abstract availableKeywords
Funding Information
- Japan Society for the Promotion of Science (15310088, 18.282)
- Ministry of Education, Culture, Sports, Science and Technology
- National Institutes of Health (S06GM08102)
- Inamori Foundation
- Casio Science Promotion Foundation
- Kayamori Foundation of Informational Science Advancement
This publication has 10 references indexed in Scilit:
- A combined molecular dynamics/density-functional theoretical study on the structure and electronic properties of hydrating water molecules in the minor groove of decameric DNA duplexChemical Physics Letters, 2007
- Hybridization energies of double strands composed of DNA, RNA, PNA and LNAChemical Physics Letters, 2007
- Density-functional theoretical study on hydrated DNA duplex: Effect of hydrating water molecules on HOMO distribution in DNAChemical Physics Letters, 2006
- LNA: a versatile tool for therapeutics and genomicsPublished by Elsevier ,2003
- Single nucleotide polymorphism genotyping using locked nucleic acid (LNA™)Expert Review of Molecular Diagnostics, 2003
- X-ray crystal structure of a locked nucleic acid (LNA) duplex composed of a palindromic 10-mer DNA strand containing one LNA thymine monomerChemical Communications, 2001
- From molecules to solids with the DMol3 approachThe Journal of Chemical Physics, 2000
- Improved adsorption energetics within density-functional theory using revised Perdew-Burke-Ernzerhof functionalsPhysical Review B, 1999
- NMR solution structure of a DNA dodecamer containing single G*T mismatchesNucleic Acids Research, 1998
- A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic MoleculesJournal of the American Chemical Society, 1995