Charge optimization leads to favorable electrostatic binding free energy
- 1 May 1999
- journal article
- research article
- Published by American Physical Society (APS) in Physical Review E
- Vol. 59 (5) , 5958-5961
- https://doi.org/10.1103/physreve.59.5958
Abstract
Variational optimization of molecular electrostatic charge distributions is a tool for the study of association reactions of molecules in solution. In principle, this method can be used in drug design and protein folding to analyze and improve molecular interactions and to provide electrostatic templates for molecular design. This optimization problem reduces to an inverse source problem in classical electrostatics, where the sources are determined by a combination of external and self-polarization potentials. In this paper, we show that the electrostatic portion of the free energy of association for electrostatically optimized molecules has an upper bound of zero in many situations of physical interest. That is, variational optimization provides a ligand-charge distribution that contributes favorably to the energetics of binding, even in a strongly polar medium. This stabilizing effect on association reactions is contrary to the usual role of electrostatics in aqueous complexes, in which desolvation effects generally dominate. We also show the existence and nonuniqueness of the variational solution and make a connection to the electrostatic image charge problem.Keywords
This publication has 10 references indexed in Scilit:
- Classical Electrodynamics, 3rd ed.American Journal of Physics, 1999
- Optimizing electrostatic affinity in ligand–receptor binding: Theory, computation, and ligand propertiesThe Journal of Chemical Physics, 1998
- Effects of salt bridges on protein structure and designProtein Science, 1998
- Computation of electrostatic complements to proteins: A case of charge stabilized bindingProtein Science, 1998
- Optimization of electrostatic binding free energyThe Journal of Chemical Physics, 1997
- Classical Electrostatics in Biology and ChemistryScience, 1995
- Do salt bridges stabilize proteins? A continuum electrostatic analysisProtein Science, 1994
- Macroscopic models of aqueous solutions: biological and chemical applicationsThe Journal of Physical Chemistry, 1993
- Building models of globular protein molecules from their amino acid sequencesJournal of Molecular Biology, 1982
- The Role of the α-Helix in the Structure of Proteins. Optical Rotatory Dispersion of β-Lactoglobulin1aJournal of the American Chemical Society, 1960