A genomewide oscillation in transcription gates DNA replication and cell cycle
- 20 January 2004
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 101 (5) , 1200-1205
- https://doi.org/10.1073/pnas.0306490101
Abstract
Microarray analysis from a yeast continuous synchrony culture system shows a genomewide oscillation in transcription. Maximums in transcript levels occur at three nearly equally spaced intervals in this ≈40-min cycle of respiration and reduction. Two temporal clusters (4,679 of 5,329) are maximally expressed during the reductive phase of the cycle, whereas a third cluster (650) is maximally expressed during the respiratory phase. Transcription is organized functionally into redox-state superclusters with genes known to be important in respiration or reduction being synthesized in opposite phases of the cycle. The transcriptional cycle gates synchronous bursts in DNA replication in a constant fraction of the population at 40-min intervals. Restriction of DNA synthesis to the reductive phase of the cycle may be an evolutionarily important mechanism for reducing oxidative damage to DNA during replication.Keywords
This publication has 43 references indexed in Scilit:
- Sequencing and comparison of yeast species to identify genes and regulatory elementsNature, 2003
- Dissection of Transient Oxidative Stress Response inSaccharomyces cerevisiaeby Using DNA MicroarraysMolecular Biology of the Cell, 2002
- Cell kinetic studies in murine ventral tongue epithelium: cell cycle progression studies using double labelling techniquesCell Proliferation, 2002
- Evidence that a free-running oscillator drives G1 events in the budding yeast cell cycleNature, 1999
- Oscillatory metabolism of Saccharomyces cerevisiae in continuous cultureFEMS Microbiology Letters, 1992
- Cell Cycle Synchronization of Gonyaulax polyedra by Filtration: Quantized Generation TimesJournal of Biological Rhythms, 1988
- INFLUENCE OF ENVIRONMENTAL FACTORS AND POPULATION COMPOSITION ON THE TIMING OF CELL DIVISION IN THALASSIOSIRA FLUVIATILIS (BACILLARIOPHYCEAE) GROWN ON LIGHT/DARK CYCLES1Journal of Phycology, 1980
- Oscillation and Chaos in Physiological Control SystemsScience, 1977
- The mitotic oscillator in Physarum polycephalumJournal of Theoretical Biology, 1975
- Respiratory Oscillations and Heat Evolution in Synchronously Dividing Cultures of the Fission Yeast Schizosaccharomyces pombe 972h-Journal of General Microbiology, 1973