The 2.1 .ANG. resolution structure of iron superoxide dismutase from Pseudomonas ovalis
- 24 September 1990
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 29 (38) , 8885-8893
- https://doi.org/10.1021/bi00490a002
Abstract
The 2.1-.ANG. resolution crystal structure of native uncomplexed iron superoxide dismutase (EC 1.15.1.1) from Pseudomonas ovalis was solved and refined to a final R factor of 24%. The dimeric structure contains one catalytic iron center per monomer with an asymmetric trigonal-bipyramidal coordination of protein ligands to the metal. Each monomer contains two domains, with the trigonal ligands (histidines 74 and 160; aspartate 156) contributed by the large domain and stabilized by an extended hydrogen-bonded network, including residues from opposing monomers. The axial ligand (histidine 26) is found on the small domain and does not participate extensively in the stabilizing H-bond network. The open axial coordination position of the iron is devoid of bound water molecules or anions. The metal is located 0.5 .ANG. out of the plane of the trigonal ligand toward histidine 26, providing a slightly skewed coordination away from the iron binding site. The molecule contains a glutamine residue in the active site which is conserved between all iron enzymes sequenced to data but which is conserved among all manganese SODs at a separate position in the sequence. This residue shows the same structural interactions in both cases, implying that iron and manganese SODs are second-site revertants of one another.This publication has 22 references indexed in Scilit:
- Structure of iron superoxide dismutase from Pseudomonas ovalis at 2.9-A resolution.Proceedings of the National Academy of Sciences, 1983
- Electrostatic facilitation of the reaction catalyzed by the manganese-containing and the iron-containing superoxide dismutasesArchives of Biochemistry and Biophysics, 1983
- Potentiometric titrations and oxidation-reduction potentials of several iron superoxide dismutasesBiochemistry, 1983
- Isolation of iron-containing superoxide dismutase from Bacteroides fragilis: Reconstitution as a Mn-containing enzymeArchives of Biochemistry and Biophysics, 1983
- Synthesis of either Fe- or Mn-superoxide dismutase with an apparently identical protein moiety by an anaerobic bacterium dependent on the metal supplied.Journal of Biological Chemistry, 1982
- Cadmium, Chromium, and Manganese Replacement for Iron in Iron-Superoxide Dismutase from Pseudomonas ovalis1The Journal of Biochemistry, 1980
- Manganese-containing superoxide dismutase from Escherichia coli: Reversible resolution and metal replacementsArchives of Biochemistry and Biophysics, 1979
- Inhibition of superoxide dismutases by azideArchives of Biochemistry and Biophysics, 1978
- Low-resolution structure of the glycogen phosphorylase a monomer and comparison with phosphorylase bJournal of Molecular Biology, 1976
- Design of a diffractometer and flow cell system for X-ray analysis of crystalline proteins with applications to the crystal chemistry of ribonuclease-SJournal of Molecular Biology, 1967