Mapping pathways of allosteric communication in GroEL by analysis of correlated mutations
- 12 July 2002
- journal article
- research article
- Published by Wiley in Proteins-Structure Function and Bioinformatics
- Vol. 48 (4) , 611-617
- https://doi.org/10.1002/prot.10180
Abstract
An interesting example of an allosteric protein is the chaperonin GroEL. It undergoes adenosine 5′‐triphosphate‐induced conformational changes that are reflected in binding of adenosine 5′‐triphosphate with positive cooperativity within rings and negative cooperativity between rings. Herein, correlated mutations in chaperonins are analyzed to unravel routes of allosteric communication in GroEL and in its complex with its co‐chaperonin GroES. It is shown that analysis of correlated mutations in the chaperonin family can provide information about pathways of allosteric communication within GroEL and between GroEL and GroES. The results are discussed in the context of available structural, genetic, and biochemical data concerning short‐ and long‐range interactions in the GroE system. Proteins 2002;48:611–617.Keywords
This publication has 37 references indexed in Scilit:
- ATP-Bound States of GroEL Captured by Cryo-Electron MicroscopyPublished by Elsevier ,2001
- Molecular Mechanisms of Chaperonin GroEL−GroES FunctionBiochemistry, 2001
- A dynamic model for the allosteric mechanism of GroEL 1 1Edited by A. FershtJournal of Molecular Biology, 2000
- Conformational changes in the chaperonin GroEL: new insights into the allosteric mechanism 1 1Edited by A. R. FershtJournal of Molecular Biology, 1999
- Gapped BLAST and PSI-BLAST: a new generation of protein database search programsNucleic Acids Research, 1997
- Inter-ring Communication is Disrupted in the GroEL Mutant Arg13 → Gly; Ala126 → Val with Known Crystal StructureJournal of Molecular Biology, 1996
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceNucleic Acids Research, 1994
- Prediction of an Inter-residue Interaction in the Chaperonin GroEL from Multiple Sequence Alignment is Confirmed by Double-mutant Cycle AnalysisJournal of Molecular Biology, 1994
- Mutation Ala2 → Ser Destabilizes Intersubunit Interactions in the Molecular Chaperone GroELJournal of Molecular Biology, 1993
- Correlation of co-ordinated amino acid substitutions with function in viruses related to tobacco mosaic virusJournal of Molecular Biology, 1987