Radical Phosphate Transfer Mechanism for the Thiamin Diphosphate- and FAD-Dependent Pyruvate Oxidase from Lactobacillus plantarum. Kinetic Coupling of Intercofactor Electron Transfer with Phosphate Transfer to Acetyl-thiamin Diphosphate via a Transient FAD Semiquinone/Hydroxyethyl-ThDP Radical Pair
Open Access
- 15 September 2005
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 44 (40) , 13291-13303
- https://doi.org/10.1021/bi051058z
Abstract
The thiamin diphosphate (ThDP)- and flavin adenine dinucleotide (FAD)-dependent pyruvate oxidase from Lactobacillus plantarum catalyses the conversion of pyruvate, inorganic phosphate, and oxygen to acetyl-phosphate, carbon dioxide, and hydrogen peroxide. Central to the catalytic sequence, two reducing equivalents are transferred from the resonant carbanion/enamine forms of α-hydroxyethyl-ThDP to the adjacent flavin cofactor over a distance of approximately 7 Å, followed by the phosphorolysis of the thereby formed acetyl-ThDP. Pre-steady-state and steady-state kinetics using time-resolved spectroscopy and a 1H NMR-based intermediate analysis indicate that both processes are kinetically coupled. In the presence of phosphate, intercofactor electron-transfer (ET) proceeds with an apparent first-order rate constant of 78 s-1 and is kinetically gated by the preceding formation of the tetrahedral substrate−ThDP adduct 2-lactyl-ThDP and its decarboxylation. No transient flavin radicals are detectable in the reductive half-reaction. In contrast, when phosphate is absent, ET occurs in two discrete steps with apparent rate constants of 81 and 3 s-1 and transient formation of a flavin semiquinone/hydroxyethyl-ThDP radical pair. Temperature dependence analysis according to the Marcus theory identifies the second step, the slow radical decay to be a true ET reaction. The redox potentials of the FADox/FADsq (E1 = −37 mV) and FADsq/FADred (E2 = −87 mV) redox couples in the absence and presence of phosphate are identical. Both the Marcus analysis and fluorescence resonance energy-transfer studies using the fluorescent N3‘-pyridyl-ThDP indicate the same cofactor distance in the presence or absence of phosphate. We deduce that the exclusive 102−103-fold rate enhancement of the second ET step is rather due to the nucleophilic attack of phosphate on the kinetically stabilized hydroxyethyl-ThDP radical resulting in a low-potential anion radical adduct than phosphate in a docking site being part of a through-bonded ET pathway in a stepwise mechanism of ET and phosporolysis. Thus, LpPOX would constitute the first example of a radical-based phosphorolysis mechanism in biochemistry.Keywords
This publication has 7 references indexed in Scilit:
- Electron Transfer in Acetohydroxy Acid Synthase as a Side Reaction of Catalysis. Implications for the Reactivity and Partitioning of the Carbanion/Enamine Form of (α-Hydroxyethyl)thiamin Diphosphate in a “Nonredox” FlavoenzymeBiochemistry, 2004
- Pyruvate Ferredoxin Oxidoreductase and Its Radical IntermediateChemical Reviews, 2003
- Activation of Thiamin Diphosphate and FAD in the Phosphatedependent Pyruvate Oxidase fromLactobacillus plantarumJournal of Biological Chemistry, 1998
- Electron transfer in ruthenium-modified proteinsChemical Reviews, 1992
- Activation of Escherichia coli pyruvate oxidase enhances the oxidation of hydroxyethylthiamin pyrophosphateJournal of Biological Chemistry, 1991
- Function of the aminopyrimidine part in thiamine pyrophosphate enzymesBioorganic Chemistry, 1991
- Electrochemical oxidation of enamines related to the key intermediate on thiamin diphosphate dependent enzymic pathways: evidence for one-electron oxidation via a thiazolium cation radicalJournal of the American Chemical Society, 1990