Operator-splitting integrators for constant-temperature molecular dynamics
- 8 April 1997
- journal article
- research article
- Published by AIP Publishing in The Journal of Chemical Physics
- Vol. 106 (14) , 6102-6106
- https://doi.org/10.1063/1.473273
Abstract
The Gaussian thermostatting technique has been widely used in constant-temperature molecular dynamics. In this paper we develop operator-splitting integrators for the Gaussian thermostated equations of motion. The new integrators are explicit, very simple to program, and require minimum computer memory. In particular, they can preserve the constancy of the system’s kinetic energy. Numerical experiments show that the present integrators are much more efficient than conventional integrators such as the Runge-Kutta methods. Extension of the integrators to multiple timescale MD simulations is also discussed.Keywords
This publication has 30 references indexed in Scilit:
- Molecular dynamics for nonequilibrium systems in which there are a small number of very hot particles in a cold bath: Reference system propagator methodsThe Journal of Chemical Physics, 1996
- Explicit reversible integrators for extended systems dynamicsMolecular Physics, 1996
- Symplectic integrators for large scale molecular dynamics simulations: A comparison of several explicit methodsThe Journal of Chemical Physics, 1994
- Canonical numerical methods for molecular dynamics simulationsJournal of Computational Chemistry, 1994
- Dynamics of molecules with internal degrees of freedom by multiple time-step methodsThe Journal of Chemical Physics, 1993
- Reversible multiple time scale molecular dynamicsThe Journal of Chemical Physics, 1992
- Hamiltonian algorithms for Hamiltonian systems and a comparative numerical studyComputer Physics Communications, 1991
- Vectorizing a general purpose molecular dynamics simulation programJournal of Computational Chemistry, 1986
- Nonequilibrium molecular dynamics via Gauss's principle of least constraintPhysical Review A, 1983
- High-Strain-Rate Plastic Flow Studied via Nonequilibrium Molecular DynamicsPhysical Review Letters, 1982