Efficiency of DNA replication in the polymerase chain reaction
- 12 November 1996
- journal article
- Published by Proceedings of the National Academy of Sciences in Proceedings of the National Academy of Sciences
- Vol. 93 (23) , 12947-12952
- https://doi.org/10.1073/pnas.93.23.12947
Abstract
A detailed quantitative kinetic model for the polymerase chain reaction (PCR) is developed, which allows us to predict the probability of replication of a DNA molecule in terms of the physical parameters involved in the system. The important issue of the determination of the number of PCR cycles during which this probability can be considered to be a constant is solved within the framework of the model. New phenomena of multimodality and scaling behavior in the distribution of the number of molecules after a given number of PCR cycles are presented. The relevance of the model for quantitative PCR is discussed, and a novel quantitative PCR technique is proposed.Keywords
This publication has 17 references indexed in Scilit:
- Transcription Against an Applied ForceScience, 1995
- The Polymerase Chain Reaction and Branching ProcessesJournal of Computational Biology, 1995
- Modeling the Polymerase Chain ReactionJournal of Computational Biology, 1995
- Molecular Computation of Solutions to Combinatorial ProblemsScience, 1994
- Quantitative PCR and RT-PCR in virology.Genome Research, 1993
- Quantitative or semi-quantitative PCR: reality versus myth.Genome Research, 1992
- Kinetic mechanism of DNA polymerase I(Klenow fragment): identification of a second conformational change and evaluation of the internal equilibrium constantBiochemistry, 1991
- Pre-steady-state kinetic analysis of processive DNA replication including complete characterization of an exonuclease-deficient mutantBiochemistry, 1991
- DNA amplification by the polymerase chain reactionAnalytical Chemistry, 1990
- Kinetic mechanism of DNA polymerase I (Klenow)Biochemistry, 1987