Evidence for an α-Helix → π-Bulge Helicity Modulation for the neu/erbB-2 Membrane-Spanning Segment. A 1H NMR and Circular Dichroism Study,
- 1 May 2001
- journal article
- research article
- Published by American Chemical Society (ACS) in Biochemistry
- Vol. 40 (21) , 6534-6540
- https://doi.org/10.1021/bi0027938
Abstract
The 35-residue peptide corresponding to the very hydrophobic transmembrane region of the tyrosine kinase receptor neu, NeuTM35, has been synthesized. The peptide can be solubilized in millimolar concentrations in TFE or incorporated into an SDS−water micellar solution or into well-hydrated DMPC/DCPC bicelles. In all these media, circular dichroism demonstrated that the peptide adopts a helical structure for about 80% of its amino acids. The peptide is monomeric below 2 mM in TFE, as also determined by variable concentration experiments. The three-dimensional solution structure in TFE has been obtained by homonuclear proton NMR and shows a well-defined α-helix from residues 4 to 21, then a π-bulge from Ile22 to Gly28, and a final short α-helix from positions 29 to 32. This experimental finding is in agreement with structures predicted recently by molecular dynamics calculations in a vacuum [Sajot, N., and Genest, M. (2000) Eur. Biophys. J.28, 648−662]. The biological implications of a possible retention of this structure in a membrane environment are finally discussed.Keywords
This publication has 11 references indexed in Scilit:
- Structure prediction of the dimeric neu/ErbB-2 transmembrane domain from multi-nanosecond molecular dynamics simulationsEuropean Biophysics Journal, 2000
- Purification of the c-erbB2/neu membrane-spanning segment:: a hydrophobic challengeJournal of Chromatography B: Biomedical Sciences and Applications, 2000
- Chemical synthesis of yeast mitochondrial ATP synthase membranous subunit 8Journal of Peptide Science, 1999
- Torsion angle dynamics for NMR structure calculation with the new program DyanaJournal of Molecular Biology, 1997
- A Synthetic Peptide from the Human Immunodeficiency Virus Type‐1 Integrase Exhibits Coiled‐Coil Properties and Interferes with the in Vitro Integration Activity of The EnzymeEuropean Journal of Biochemistry, 1996
- Three dimensional structure of the transmembrane region of the proto-oncogenic and oncogenic forms of the neu protein.The EMBO Journal, 1992
- Efficient analysis of protein 2D NMR spectra using the software packageEASYJournal of Biomolecular NMR, 1991
- Variable selection method improves the prediction of protein secondary structure from circular dichroism spectraAnalytical Biochemistry, 1987
- Three-dimensional structure of catalase from Penicillium vitale at 2.0 Å resolutionJournal of Molecular Biology, 1986
- NMR with Proteins and Nucleic AcidsEurophysics News, 1986