SNP-o-matic
Open Access
- 2 July 2009
- journal article
- research article
- Published by Oxford University Press (OUP) in Bioinformatics
- Vol. 25 (18) , 2434-2435
- https://doi.org/10.1093/bioinformatics/btp403
Abstract
Motivation: High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient and stringent read mapping tool offering a variety of analytical output functions, with an emphasis on genotyping. Availability:http://snpomatic.sourceforge.net Contact:mm6@sanger.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online.Keywords
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